us | Bio Informatics Engineer - Sunset Hills in Doniphan, MO

Bio Informatics Engineer - Sunset Hills

  • deegit
  • Doniphan, MO 63935
  • Full-Time
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Job Role Bio Informatics Engineer Software Engineer Location St Louis, MO Duration 6 Months Responsibility Develop automated scripts to parse and extract information form primary sources Develop automated software to package and release the Knowledge Base Parse and manipulate data in a variety of formats (e.g. JSON, CSV, TSV) Develop scripts in Python to download and extract information from primary sources and ontologies (e.g. SNOMED) Creation of serialized data objected in Java andor Python Set-up automated processing environments using Docker, AWS Batch, AWS ECR, Java and MongoDB Job Description Bioinformatician with 12 years of experience in Genomics Domain - Cosmic working with NGS data. Domain knowledge familiarity with primary sources including FDA EMA drug labels, oncology databases (e.g. COSMIC, TCGA, cBioPortal, clinical guidelines (e.g. NCCN, ASCO, ESMO) and genomic file formats (e.g. VCF, GFF)


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